Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rfer_2021 | Rfer_2333 | Rfer_2021 | Rfer_2333 | Lyso-ornithine lipid acyltransferase. | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.819 |
Rfer_2021 | Rfer_2374 | Rfer_2021 | Rfer_2374 | Lyso-ornithine lipid acyltransferase. | Putative ferredoxin. | 0.800 |
Rfer_2021 | Rfer_3670 | Rfer_2021 | Rfer_3670 | Lyso-ornithine lipid acyltransferase. | FAD dependent oxidoreductase. | 0.819 |
Rfer_2021 | Rfer_3693 | Rfer_2021 | Rfer_3693 | Lyso-ornithine lipid acyltransferase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.904 |
Rfer_2021 | gpsA | Rfer_2021 | Rfer_1313 | Lyso-ornithine lipid acyltransferase. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.826 |
Rfer_2021 | plsY | Rfer_2021 | Rfer_2695 | Lyso-ornithine lipid acyltransferase. | Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.927 |
Rfer_2333 | Rfer_2021 | Rfer_2333 | Rfer_2021 | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Lyso-ornithine lipid acyltransferase. | 0.819 |
Rfer_2333 | Rfer_2374 | Rfer_2333 | Rfer_2374 | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Putative ferredoxin. | 0.929 |
Rfer_2333 | Rfer_3670 | Rfer_2333 | Rfer_3670 | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | FAD dependent oxidoreductase. | 0.920 |
Rfer_2333 | Rfer_3693 | Rfer_2333 | Rfer_3693 | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.819 |
Rfer_2333 | glpK | Rfer_2333 | Rfer_3678 | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.991 |
Rfer_2333 | gpsA | Rfer_2333 | Rfer_1313 | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.931 |
Rfer_2333 | plsY | Rfer_2333 | Rfer_2695 | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.916 |
Rfer_2374 | Rfer_2021 | Rfer_2374 | Rfer_2021 | Putative ferredoxin. | Lyso-ornithine lipid acyltransferase. | 0.800 |
Rfer_2374 | Rfer_2333 | Rfer_2374 | Rfer_2333 | Putative ferredoxin. | FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.929 |
Rfer_2374 | Rfer_3670 | Rfer_2374 | Rfer_3670 | Putative ferredoxin. | FAD dependent oxidoreductase. | 0.929 |
Rfer_2374 | Rfer_3693 | Rfer_2374 | Rfer_3693 | Putative ferredoxin. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.800 |
Rfer_2374 | gpsA | Rfer_2374 | Rfer_1313 | Putative ferredoxin. | Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.903 |
Rfer_2374 | plsY | Rfer_2374 | Rfer_2695 | Putative ferredoxin. | Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.900 |
Rfer_2694 | Rfer_2696 | Rfer_2694 | Rfer_2696 | Glutamine amidotransferase class-I. | YbaK/prolyl-tRNA synthetase associated protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. | 0.628 |
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