Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rfer_2747ABC transporter related. (269 aa)    
Predicted Functional Partners:
Rfer_2746
Binding-protein-dependent transport systems inner membrane component.
 
 0.996
Rfer_2748
Extracellular solute-binding protein, family 3.
 
 0.995
Rfer_3114
Binding-protein-dependent transport systems inner membrane component.
 
 0.983
Rfer_1460
Twin-arginine translocation pathway signal.
 
 0.980
Rfer_3116
ABC transporter, substrate-binding protein.
 
 0.976
Rfer_3118
ABC transporter, substrate-binding protein.
 
 0.976
Rfer_1776
Binding-protein-dependent transport systems inner membrane component.
 
 0.968
Rfer_1778
ABC transporter, substrate-binding protein, aliphatic sulphonates.
 
 0.937
Rfer_1779
ABC transporter, substrate-binding protein, aliphatic sulphonates.
 
 0.937
ssuB
ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
  
 
0.914
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.