Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rfer_2803Propionyl-CoA carboxylase. (510 aa)    
Predicted Functional Partners:
Rfer_2802
Carbamoyl-phosphate synthase L chain, ATP-binding.
 0.992
Rfer_0868
Carbamoyl-phosphate synthase L chain, ATP-binding.
 
 0.985
Rfer_1000
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.938
Rfer_2385
Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.938
Rfer_2594
Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.938
Rfer_3516
Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.938
Rfer_3838
acyl-CoA dehydrogenase-like.
  
 
 0.934
Rfer_3552
Branched-chain alpha-keto acid dehydrogenase E2 component.
  
 
 0.932
Rfer_0372
Methylmalonate-semialdehyde dehydrogenase (acylating).
   
 
 0.929
Rfer_2805
methylmalonyl-CoA mutase.
 
  
 0.928
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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