Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rfer_2849FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (430 aa)    
Predicted Functional Partners:
Rfer_2848
thiamineS.
 
  
 0.940
Rfer_2850
Phenylacetaldehyde:ferredoxin oxidoreductase.
 
 
 0.940
Rfer_2559
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.926
Rfer_2851
4Fe-4S ferredoxin, iron-sulfur binding.
 
 
 
 0.917
Rfer_4094
Conserved hypothetical protein.
 
 
 0.646
Rfer_2558
Assimilatory nitrite reductase (NAD(P)H) small subunit.
 
  
 0.641
Rfer_2933
Glutamate synthase (NADH) large subunit.
  
  
 0.632
Rfer_0091
Rubredoxin-type Fe(Cys)4 protein.
  
 
 0.603
Rfer_1370
Rubredoxin-type Fe(Cys)4 protein.
  
 
 0.603
Rfer_3269
Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.601
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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