Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Rfer_0778 | Rfer_1768 | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Multi-sensor hybrid histidine kinase. | 0.524 |
| Rfer_0778 | Rfer_2355 | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor. | 0.463 |
| Rfer_0778 | Rfer_2981 | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase, nitrogen specific, NtrB. | 0.516 |
| Rfer_0778 | Rfer_3013 | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | MCP methyltransferase, CheR-type. | 0.402 |
| Rfer_0778 | Rfer_3097 | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two component, sigma54 specific, transcriptional regulator, Fis family. | 0.791 |
| Rfer_1375 | Rfer_1768 | CheA signal transduction histidine kinases. | Multi-sensor hybrid histidine kinase. | 0.969 |
| Rfer_1375 | Rfer_2355 | CheA signal transduction histidine kinases. | MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor. | 0.995 |
| Rfer_1375 | Rfer_2981 | CheA signal transduction histidine kinases. | Signal transduction histidine kinase, nitrogen specific, NtrB. | 0.462 |
| Rfer_1375 | Rfer_3013 | CheA signal transduction histidine kinases. | MCP methyltransferase, CheR-type. | 0.984 |
| Rfer_1375 | Rfer_3097 | CheA signal transduction histidine kinases. | Two component, sigma54 specific, transcriptional regulator, Fis family. | 0.566 |
| Rfer_1768 | Rfer_0778 | Multi-sensor hybrid histidine kinase. | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.524 |
| Rfer_1768 | Rfer_1375 | Multi-sensor hybrid histidine kinase. | CheA signal transduction histidine kinases. | 0.969 |
| Rfer_1768 | Rfer_2355 | Multi-sensor hybrid histidine kinase. | MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor. | 0.968 |
| Rfer_1768 | Rfer_2981 | Multi-sensor hybrid histidine kinase. | Signal transduction histidine kinase, nitrogen specific, NtrB. | 0.680 |
| Rfer_1768 | Rfer_3013 | Multi-sensor hybrid histidine kinase. | MCP methyltransferase, CheR-type. | 0.936 |
| Rfer_1768 | Rfer_3087 | Multi-sensor hybrid histidine kinase. | Periplasmic sensor signal transduction histidine kinase. | 0.914 |
| Rfer_1768 | Rfer_3096 | Multi-sensor hybrid histidine kinase. | Periplasmic sensor signal transduction histidine kinase. | 0.933 |
| Rfer_1768 | Rfer_3097 | Multi-sensor hybrid histidine kinase. | Two component, sigma54 specific, transcriptional regulator, Fis family. | 0.561 |
| Rfer_1768 | Rfer_3574 | Multi-sensor hybrid histidine kinase. | Periplasmic sensor signal transduction histidine kinase. | 0.704 |
| Rfer_2355 | Rfer_0778 | MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor. | Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.463 |
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