Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Rfer_2341 | Rfer_3196 | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.459 |
| Rfer_2341 | Rfer_3209 | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Pyruvate flavodoxin/ferredoxin oxidoreductase-like. | 0.701 |
| Rfer_3194 | Rfer_3195 | Uncharacterized protein UPF0065. | Short-chain dehydrogenase/reductase SDR. | 0.678 |
| Rfer_3194 | Rfer_3196 | Uncharacterized protein UPF0065. | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.450 |
| Rfer_3194 | Rfer_3197 | Uncharacterized protein UPF0065. | Cytochrome c, class I. | 0.425 |
| Rfer_3195 | Rfer_3194 | Short-chain dehydrogenase/reductase SDR. | Uncharacterized protein UPF0065. | 0.678 |
| Rfer_3195 | Rfer_3196 | Short-chain dehydrogenase/reductase SDR. | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.508 |
| Rfer_3195 | Rfer_3197 | Short-chain dehydrogenase/reductase SDR. | Cytochrome c, class I. | 0.478 |
| Rfer_3196 | Rfer_2341 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.459 |
| Rfer_3196 | Rfer_3194 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Uncharacterized protein UPF0065. | 0.450 |
| Rfer_3196 | Rfer_3195 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Short-chain dehydrogenase/reductase SDR. | 0.508 |
| Rfer_3196 | Rfer_3197 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Cytochrome c, class I. | 0.731 |
| Rfer_3196 | Rfer_3198 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | FMN-binding. | 0.810 |
| Rfer_3196 | Rfer_3199 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Twin-arginine translocation pathway signal. | 0.588 |
| Rfer_3196 | Rfer_3200 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Periplasmic copper-binding. | 0.468 |
| Rfer_3196 | Rfer_3202 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Putative transmembrane protein. | 0.451 |
| Rfer_3196 | Rfer_3208 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Glutamate synthase (NADPH) small chain; Sulfide dehydrogenase (flavoprotein) subunit SudB / sulfide dehydrogenase (flavoprotein) subunit SudA. | 0.517 |
| Rfer_3196 | Rfer_3209 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Pyruvate flavodoxin/ferredoxin oxidoreductase-like. | 0.441 |
| Rfer_3197 | Rfer_3194 | Cytochrome c, class I. | Uncharacterized protein UPF0065. | 0.425 |
| Rfer_3197 | Rfer_3195 | Cytochrome c, class I. | Short-chain dehydrogenase/reductase SDR. | 0.478 |
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