Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Rfer_1886 | Rfer_1933 | Putative nitric oxide reductase (subunit B) transmembrane protein. | Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.837 |
| Rfer_1886 | Rfer_3198 | Putative nitric oxide reductase (subunit B) transmembrane protein. | FMN-binding. | 0.949 |
| Rfer_1886 | Rfer_3199 | Putative nitric oxide reductase (subunit B) transmembrane protein. | Twin-arginine translocation pathway signal. | 0.990 |
| Rfer_1886 | Rfer_3200 | Putative nitric oxide reductase (subunit B) transmembrane protein. | Periplasmic copper-binding. | 0.622 |
| Rfer_1886 | Rfer_3202 | Putative nitric oxide reductase (subunit B) transmembrane protein. | Putative transmembrane protein. | 0.653 |
| Rfer_1933 | Rfer_1886 | Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | Putative nitric oxide reductase (subunit B) transmembrane protein. | 0.837 |
| Rfer_1933 | Rfer_3198 | Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | FMN-binding. | 0.828 |
| Rfer_1933 | Rfer_3199 | Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | Twin-arginine translocation pathway signal. | 0.603 |
| Rfer_3196 | Rfer_3198 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | FMN-binding. | 0.810 |
| Rfer_3196 | Rfer_3199 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Twin-arginine translocation pathway signal. | 0.588 |
| Rfer_3196 | Rfer_3200 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Periplasmic copper-binding. | 0.468 |
| Rfer_3196 | Rfer_3202 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Putative transmembrane protein. | 0.451 |
| Rfer_3196 | Rfer_3203 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | NosL. | 0.431 |
| Rfer_3196 | Rfer_3206 | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Putative lipoprotein involved in nitrous oxide reduction. | 0.427 |
| Rfer_3198 | Rfer_1886 | FMN-binding. | Putative nitric oxide reductase (subunit B) transmembrane protein. | 0.949 |
| Rfer_3198 | Rfer_1933 | FMN-binding. | Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.828 |
| Rfer_3198 | Rfer_3196 | FMN-binding. | ApbE-like lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.810 |
| Rfer_3198 | Rfer_3199 | FMN-binding. | Twin-arginine translocation pathway signal. | 0.995 |
| Rfer_3198 | Rfer_3200 | FMN-binding. | Periplasmic copper-binding. | 0.981 |
| Rfer_3198 | Rfer_3201 | FMN-binding. | ABC transporter related. | 0.947 |
page 1 of 5