Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rfer_3209Pyruvate flavodoxin/ferredoxin oxidoreductase-like. (1663 aa)    
Predicted Functional Partners:
Rfer_2185
Pyruvate ferredoxin oxidoreductase, beta subunit.
 
0.999
Rfer_2798
Thiamine pyrophosphate enzyme-like TPP-binding.
  
 0.999
Rfer_2799
Pyruvate flavodoxin/ferredoxin oxidoreductase-like.
  
 0.999
Rfer_2186
Pyruvate ferredoxin oxidoreductase, alpha subunit.
 
0.998
Rfer_2187
Pyruvate ferredoxin oxidoreductase, gamma subunit.
 
0.997
Rfer_3868
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
 0.992
Rfer_2184
2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate.
 
 
 0.980
Rfer_3208
Glutamate synthase (NADPH) small chain; Sulfide dehydrogenase (flavoprotein) subunit SudB / sulfide dehydrogenase (flavoprotein) subunit SudA.
 
  
 0.974
Rfer_0620
Citrate utilization protein B.
 
 
 0.971
Rfer_0262
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 0.970
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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