Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rfer_3262Conserved hypothetical protein. (68 aa)    
Predicted Functional Partners:
Rfer_3261
Twin-arginine translocation pathway signal; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.668
Rfer_3263
Cytoplasmic chaperone TorD.
       0.577
Rfer_3265
Conserved hypothetical protein.
       0.565
Rfer_3266
Conserved hypothetical protein.
       0.565
Rfer_3264
4Fe-4S ferredoxin, iron-sulfur binding.
       0.556
Rfer_3259
Putative lipoprotein.
       0.550
Rfer_3258
Formate dehydrogenase gamma subunit.
       0.539
Rfer_3257
Conserved hypothetical protein.
       0.535
Rfer_3260
4Fe-4S ferredoxin, iron-sulfur binding.
       0.485
fdhD
Formate dehydrogenase, subunit FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
       0.456
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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