Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rfer_2867 | Rfer_2869 | Rfer_2867 | Rfer_2869 | Putative exported protein. | Binding-protein-dependent transport systems inner membrane component. | 0.993 |
| Rfer_2867 | Rfer_3090 | Rfer_2867 | Rfer_3090 | Putative exported protein. | 4Fe-4S ferredoxin, iron-sulfur binding. | 0.774 |
| Rfer_2867 | Rfer_3258 | Rfer_2867 | Rfer_3258 | Putative exported protein. | Formate dehydrogenase gamma subunit. | 0.773 |
| Rfer_2867 | Rfer_3260 | Rfer_2867 | Rfer_3260 | Putative exported protein. | 4Fe-4S ferredoxin, iron-sulfur binding. | 0.783 |
| Rfer_2867 | Rfer_3261 | Rfer_2867 | Rfer_3261 | Putative exported protein. | Twin-arginine translocation pathway signal; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.775 |
| Rfer_2867 | Rfer_3263 | Rfer_2867 | Rfer_3263 | Putative exported protein. | Cytoplasmic chaperone TorD. | 0.777 |
| Rfer_2867 | Rfer_3264 | Rfer_2867 | Rfer_3264 | Putative exported protein. | 4Fe-4S ferredoxin, iron-sulfur binding. | 0.772 |
| Rfer_2867 | Rfer_3265 | Rfer_2867 | Rfer_3265 | Putative exported protein. | Conserved hypothetical protein. | 0.561 |
| Rfer_2867 | Rfer_3266 | Rfer_2867 | Rfer_3266 | Putative exported protein. | Conserved hypothetical protein. | 0.540 |
| Rfer_2867 | fdhD | Rfer_2867 | Rfer_3256 | Putative exported protein. | Formate dehydrogenase, subunit FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.784 |
| Rfer_2869 | Rfer_2867 | Rfer_2869 | Rfer_2867 | Binding-protein-dependent transport systems inner membrane component. | Putative exported protein. | 0.993 |
| Rfer_2869 | Rfer_3090 | Rfer_2869 | Rfer_3090 | Binding-protein-dependent transport systems inner membrane component. | 4Fe-4S ferredoxin, iron-sulfur binding. | 0.764 |
| Rfer_2869 | Rfer_3258 | Rfer_2869 | Rfer_3258 | Binding-protein-dependent transport systems inner membrane component. | Formate dehydrogenase gamma subunit. | 0.745 |
| Rfer_2869 | Rfer_3260 | Rfer_2869 | Rfer_3260 | Binding-protein-dependent transport systems inner membrane component. | 4Fe-4S ferredoxin, iron-sulfur binding. | 0.766 |
| Rfer_2869 | Rfer_3261 | Rfer_2869 | Rfer_3261 | Binding-protein-dependent transport systems inner membrane component. | Twin-arginine translocation pathway signal; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.774 |
| Rfer_2869 | Rfer_3263 | Rfer_2869 | Rfer_3263 | Binding-protein-dependent transport systems inner membrane component. | Cytoplasmic chaperone TorD. | 0.788 |
| Rfer_2869 | Rfer_3264 | Rfer_2869 | Rfer_3264 | Binding-protein-dependent transport systems inner membrane component. | 4Fe-4S ferredoxin, iron-sulfur binding. | 0.755 |
| Rfer_2869 | Rfer_3265 | Rfer_2869 | Rfer_3265 | Binding-protein-dependent transport systems inner membrane component. | Conserved hypothetical protein. | 0.407 |
| Rfer_2869 | Rfer_3266 | Rfer_2869 | Rfer_3266 | Binding-protein-dependent transport systems inner membrane component. | Conserved hypothetical protein. | 0.444 |
| Rfer_2869 | fdhD | Rfer_2869 | Rfer_3256 | Binding-protein-dependent transport systems inner membrane component. | Formate dehydrogenase, subunit FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.782 |
page 1 of 6