STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rfer_4075NapC/NirT cytochrome c-like. (198 aa)    
Predicted Functional Partners:
Rfer_3094
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.679
Rfer_4081
Hypothetical protein.
 
 
 0.637
Rfer_3261
Twin-arginine translocation pathway signal; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.627
Rfer_3619
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.627
Rfer_3848
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.627
Rfer_4074
Hypothetical protein.
       0.613
Rfer_4076
Periplasmic nitrate reductase subunit NapC.
 
    
0.592
Rfer_2852
Putative di-heme cytochrome c.
 
     0.580
Rfer_1768
Multi-sensor hybrid histidine kinase.
   
 
 0.565
Rfer_3198
FMN-binding.
 
 
 0.564
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.