Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Rfer_4165Electron transfer flavoprotein, alpha subunit. (310 aa)    
Predicted Functional Partners:
Rfer_4166
Electron transfer flavoprotein beta-subunit.
 0.997
Rfer_4163
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.995
Rfer_1957
Electron transfer flavoprotein beta-subunit.
 0.994
Rfer_2269
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.993
Rfer_3018
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.993
Rfer_1891
2,4-dienoyl-CoA reductase.
  
 
 0.837
Rfer_4169
Butyryl-CoA dehydrogenase.
 
 
 0.818
Rfer_3506
acyl-CoA dehydrogenase-like.
 
 
 0.754
Rfer_4181
Butyryl-CoA dehydrogenase.
 
 
 0.741
Rfer_0264
acyl-CoA dehydrogenase-like.
 
 
 0.737
Your Current Organism:
Rhodoferax ferrireducens
NCBI taxonomy Id: 338969
Other names: Albidiferax ferrireducens T118, R. ferrireducens T118, Rhodoferax ferrireducens ATCC BAA-621, Rhodoferax ferrireducens DSM 15236, Rhodoferax ferrireducens T118, Rhodoferax ferrireducens str. T118, Rhodoferax ferrireducens strain T118
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