STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000772895_00788Unannotated protein. (263 aa)    
Predicted Functional Partners:
rnj
Unannotated protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.778
E4U92_24685
Unannotated protein; Purine nucleoside phosphorylase involved in purine salvage.
  
 
 0.763
GCA_000772895_00787
Unannotated protein.
       0.613
GCA_000772895_05719
Unannotated protein.
  
 
 0.556
GCA_000772895_06124
Unannotated protein.
  
 
 0.556
speB
Unannotated protein; Belongs to the arginase family.
  
 
 0.556
GCA_000772895_08280
Unannotated protein.
 
  
  0.556
GCA_000772895_00068
Unannotated protein.
 
  
  0.549
GCA_000772895_03604
Unannotated protein.
  
 
 0.542
metK
Unannotated protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
  
 
 0.542
Your Current Organism:
Streptomyces galbus
NCBI taxonomy Id: 33898
Other names: ATCC 23910, BCRC 12166, CBS 831.68, CCRC 12166, CCRC:12166, DSM 40089, IFO 12864, IMET 42937, ISP 5089, JCM 4222, JCM 4639, NBRC 12864, NCIMB 13005, NRRL B-2283, NRRL-ISP 5089, S. galbus, VKM Ac-165
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.