Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E4U92_05685 | E4U92_34570 | GCA_000772895_04047 | GCA_000772895_00933 | Unannotated protein. | Unannotated protein. | 0.705 |
E4U92_05685 | sucC | GCA_000772895_04047 | GCA_000772895_00930 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.943 |
E4U92_11925 | E4U92_34570 | GCA_000772895_03970 | GCA_000772895_00933 | Unannotated protein; Belongs to the HesB/IscA family. | Unannotated protein. | 0.770 |
E4U92_27120 | E4U92_34565 | GCA_000772895_00936 | GCA_000772895_00932 | Unannotated protein. | Unannotated protein. | 0.918 |
E4U92_27120 | E4U92_34570 | GCA_000772895_00936 | GCA_000772895_00933 | Unannotated protein. | Unannotated protein. | 0.927 |
E4U92_27120 | E4U92_34575 | GCA_000772895_00936 | GCA_000772895_00934 | Unannotated protein. | Unannotated protein. | 0.861 |
E4U92_27120 | GCA_000772895_00935 | GCA_000772895_00936 | GCA_000772895_00935 | Unannotated protein. | Unannotated protein. | 0.949 |
E4U92_27120 | GCA_000772895_01395 | GCA_000772895_00936 | GCA_000772895_01395 | Unannotated protein. | Unannotated protein. | 0.775 |
E4U92_34565 | E4U92_27120 | GCA_000772895_00932 | GCA_000772895_00936 | Unannotated protein. | Unannotated protein. | 0.918 |
E4U92_34565 | E4U92_34570 | GCA_000772895_00932 | GCA_000772895_00933 | Unannotated protein. | Unannotated protein. | 0.979 |
E4U92_34565 | E4U92_34575 | GCA_000772895_00932 | GCA_000772895_00934 | Unannotated protein. | Unannotated protein. | 0.942 |
E4U92_34565 | GCA_000772895_00935 | GCA_000772895_00932 | GCA_000772895_00935 | Unannotated protein. | Unannotated protein. | 0.930 |
E4U92_34565 | GCA_000772895_01395 | GCA_000772895_00932 | GCA_000772895_01395 | Unannotated protein. | Unannotated protein. | 0.895 |
E4U92_34565 | sucC | GCA_000772895_00932 | GCA_000772895_00930 | Unannotated protein. | Unannotated protein; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.636 |
E4U92_34570 | E4U92_05685 | GCA_000772895_00933 | GCA_000772895_04047 | Unannotated protein. | Unannotated protein. | 0.705 |
E4U92_34570 | E4U92_11925 | GCA_000772895_00933 | GCA_000772895_03970 | Unannotated protein. | Unannotated protein; Belongs to the HesB/IscA family. | 0.770 |
E4U92_34570 | E4U92_27120 | GCA_000772895_00933 | GCA_000772895_00936 | Unannotated protein. | Unannotated protein. | 0.927 |
E4U92_34570 | E4U92_34565 | GCA_000772895_00933 | GCA_000772895_00932 | Unannotated protein. | Unannotated protein. | 0.979 |
E4U92_34570 | E4U92_34575 | GCA_000772895_00933 | GCA_000772895_00934 | Unannotated protein. | Unannotated protein. | 0.973 |
E4U92_34570 | GCA_000772895_00935 | GCA_000772895_00933 | GCA_000772895_00935 | Unannotated protein. | Unannotated protein. | 0.949 |
page 1 of 3