Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E4U92_06925 | GCA_000772895_02240 | GCA_000772895_05234 | GCA_000772895_02240 | Unannotated protein. | Unannotated protein. | 0.495 |
E4U92_19625 | GCA_000772895_02240 | GCA_000772895_05167 | GCA_000772895_02240 | Unannotated protein. | Unannotated protein. | 0.415 |
GCA_000772895_02240 | E4U92_06925 | GCA_000772895_02240 | GCA_000772895_05234 | Unannotated protein. | Unannotated protein. | 0.495 |
GCA_000772895_02240 | E4U92_19625 | GCA_000772895_02240 | GCA_000772895_05167 | Unannotated protein. | Unannotated protein. | 0.415 |
GCA_000772895_02240 | GCA_000772895_05025 | GCA_000772895_02240 | GCA_000772895_05025 | Unannotated protein. | Unannotated protein. | 0.571 |
GCA_000772895_02240 | lon | GCA_000772895_02240 | GCA_000772895_02241 | Unannotated protein. | Unannotated protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.755 |
GCA_000772895_05025 | GCA_000772895_02240 | GCA_000772895_05025 | GCA_000772895_02240 | Unannotated protein. | Unannotated protein. | 0.571 |
lon | GCA_000772895_02240 | GCA_000772895_02241 | GCA_000772895_02240 | Unannotated protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | Unannotated protein. | 0.755 |