STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN55817.1Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)    
Predicted Functional Partners:
KUN55818.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.761
KUN55815.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.662
KUN55820.1
PAS sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.626
DppA2
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.591
KUN55816.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.589
KUN55823.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.587
KUN49707.1
Enamine deaminase RidA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.535
KUN55824.1
Acyl-peptide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.508
KUN55821.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.478
KUN55819.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
       0.411
Your Current Organism:
Streptomyces avermitilis
NCBI taxonomy Id: 33903
Other names: ATCC 31267, DSM 46492, JCM 5070, NBRC 14893, NCIMB 12804, NRRL 8165, S. avermitilis, Streptomyces avermectinius, Streptomyces avermectinius Takahashi et al. 2002, strain MA-4680
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