Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BTHE_0021 | BTHE_0099 | Hypothetical protein. | Glycosyltransferase. | 0.578 |
BTHE_0021 | BTHE_0101 | Hypothetical protein. | Fused ATP-binding protein and permease of ABC transporter. | 0.408 |
BTHE_0021 | BTHE_1827 | Hypothetical protein. | dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.431 |
BTHE_0098 | BTHE_0099 | Polyphosphate glucokinase/Transcriptional regulator. | Glycosyltransferase. | 0.556 |
BTHE_0099 | BTHE_0021 | Glycosyltransferase. | Hypothetical protein. | 0.578 |
BTHE_0099 | BTHE_0098 | Glycosyltransferase. | Polyphosphate glucokinase/Transcriptional regulator. | 0.556 |
BTHE_0099 | BTHE_0100 | Glycosyltransferase. | Hypothetical protein. | 0.741 |
BTHE_0099 | BTHE_0101 | Glycosyltransferase. | Fused ATP-binding protein and permease of ABC transporter. | 0.753 |
BTHE_0099 | BTHE_0309 | Glycosyltransferase. | Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase. | 0.505 |
BTHE_0099 | BTHE_1473 | Glycosyltransferase. | ABC transporter, permease. | 0.775 |
BTHE_0099 | BTHE_1474 | Glycosyltransferase. | ABC transporter, ATP-binding protein. | 0.635 |
BTHE_0099 | BTHE_1480 | Glycosyltransferase. | dTDP-rhamnosyl transferase RfbF. | 0.909 |
BTHE_0099 | BTHE_1755 | Glycosyltransferase. | UDP-galactopyranose mutase. | 0.830 |
BTHE_0099 | BTHE_1827 | Glycosyltransferase. | dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.592 |
BTHE_0100 | BTHE_0099 | Hypothetical protein. | Glycosyltransferase. | 0.741 |
BTHE_0100 | BTHE_0101 | Hypothetical protein. | Fused ATP-binding protein and permease of ABC transporter. | 0.814 |
BTHE_0101 | BTHE_0021 | Fused ATP-binding protein and permease of ABC transporter. | Hypothetical protein. | 0.408 |
BTHE_0101 | BTHE_0099 | Fused ATP-binding protein and permease of ABC transporter. | Glycosyltransferase. | 0.753 |
BTHE_0101 | BTHE_0100 | Fused ATP-binding protein and permease of ABC transporter. | Hypothetical protein. | 0.814 |
BTHE_0309 | BTHE_0099 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase. | Glycosyltransferase. | 0.505 |
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