STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTHE_0099Glycosyltransferase. (328 aa)    
Predicted Functional Partners:
BTHE_1480
dTDP-rhamnosyl transferase RfbF.
 
   
 0.909
BTHE_1755
UDP-galactopyranose mutase.
 
  
 0.830
BTHE_1473
ABC transporter, permease.
  
  
 0.775
BTHE_0101
Fused ATP-binding protein and permease of ABC transporter.
 
     0.753
BTHE_0100
Hypothetical protein.
       0.741
BTHE_1474
ABC transporter, ATP-binding protein.
  
  
 0.635
BTHE_1827
dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.592
BTHE_0021
Hypothetical protein.
 
  
 0.578
BTHE_0098
Polyphosphate glucokinase/Transcriptional regulator.
       0.556
BTHE_0309
Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase.
  
  
 0.505
Your Current Organism:
Bifidobacterium thermophilum
NCBI taxonomy Id: 33905
Other names: AS 1.2235, ATCC 25525, B. thermophilum, BCRC 14669, Bifidobacterium ruminale, Bifidobacterium thermophilium, CCRC 14669, CCRC:14669, CCUG 34983, CIP 105420, DSM 20210, HAMBI 111, LMG 11573, LMG:11573
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