STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTHE_0207ABC-type transport system, involved in lipoprotein release, permease component. (386 aa)    
Predicted Functional Partners:
BTHE_0206
ABC transporter, ATP-binding protein.
 
 0.958
BTHE_1332
ABC transporter ATP-binding protein.
 
 0.868
BTHE_1262
ATP-binding protein of ABC transporter system PC1.
 
 0.853
BTHE_0217
ABC transporter ATP-binding protein.
 
 0.837
BTHE_0205
Hypothetical protein.
 
     0.836
BTHE_0576
ABC transporter, ATP-binding protein.
 
 0.833
BTHE_0575
ABC transporter, permease protein.
 
  
 0.810
BTHE_0401
ABC transporter, ATP-binding protein.
 
 0.770
BTHE_1333
ABC transporter related protein.
 
 
0.622
BTHE_0269
ATP-binding protein of ABC transporter system.
 
 
 0.602
Your Current Organism:
Bifidobacterium thermophilum
NCBI taxonomy Id: 33905
Other names: AS 1.2235, ATCC 25525, B. thermophilum, BCRC 14669, Bifidobacterium ruminale, Bifidobacterium thermophilium, CCRC 14669, CCRC:14669, CCUG 34983, CIP 105420, DSM 20210, HAMBI 111, LMG 11573, LMG:11573
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.