Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BTHE_0299 | BTHE_0300 | Hypothetical protein. | Transcriptional regulator, LacI family. | 0.793 |
BTHE_0299 | BTHE_0301 | Hypothetical protein. | Glycosyl hydrolase family 32. | 0.804 |
BTHE_0300 | BTHE_0299 | Transcriptional regulator, LacI family. | Hypothetical protein. | 0.793 |
BTHE_0300 | BTHE_0301 | Transcriptional regulator, LacI family. | Glycosyl hydrolase family 32. | 0.589 |
BTHE_0300 | BTHE_0394 | Transcriptional regulator, LacI family. | Glucose-specific II BC. | 0.424 |
BTHE_0301 | BTHE_0299 | Glycosyl hydrolase family 32. | Hypothetical protein. | 0.804 |
BTHE_0301 | BTHE_0300 | Glycosyl hydrolase family 32. | Transcriptional regulator, LacI family. | 0.589 |
BTHE_0301 | BTHE_0394 | Glycosyl hydrolase family 32. | Glucose-specific II BC. | 0.941 |
BTHE_0301 | BTHE_0530 | Glycosyl hydrolase family 32. | Alpha amylase, catalytic domain protein. | 0.925 |
BTHE_0301 | BTHE_0702 | Glycosyl hydrolase family 32. | Fructokinase. | 0.934 |
BTHE_0301 | BTHE_0857 | Glycosyl hydrolase family 32. | Beta-glucosidase. | 0.906 |
BTHE_0301 | BTHE_1209 | Glycosyl hydrolase family 32. | Sucrose phosphorylase. | 0.974 |
BTHE_0301 | BTHE_1221 | Glycosyl hydrolase family 32. | Alpha-glucosidase. | 0.915 |
BTHE_0301 | BTHE_1535 | Glycosyl hydrolase family 32. | Glucan 1,3-beta-glucosidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.900 |
BTHE_0301 | BTHE_1645 | Glycosyl hydrolase family 32. | Alpha amylase, catalytic domain protein. | 0.926 |
BTHE_0394 | BTHE_0300 | Glucose-specific II BC. | Transcriptional regulator, LacI family. | 0.424 |
BTHE_0394 | BTHE_0301 | Glucose-specific II BC. | Glycosyl hydrolase family 32. | 0.941 |
BTHE_0394 | BTHE_0530 | Glucose-specific II BC. | Alpha amylase, catalytic domain protein. | 0.601 |
BTHE_0394 | BTHE_0702 | Glucose-specific II BC. | Fructokinase. | 0.836 |
BTHE_0394 | BTHE_0857 | Glucose-specific II BC. | Beta-glucosidase. | 0.734 |
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