STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTHE_04905-formyltetrahydrofolate cyclo-ligase. (211 aa)    
Predicted Functional Partners:
BTHE_0489
Ribosomal-protein-alanine N-acetyltransferase.
  
    0.755
BTHE_0491
Evolved beta-galactosidase subunit alpha.
       0.753
BTHE_0492
SAF domain containing protein.
       0.670
BTHE_0488
Hypothetical protein.
       0.514
BTHE_1007
Glutamate synthase [NADPH] large chain.
  
    0.512
pheT
PheT Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.500
groS
Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
     
 0.482
BTHE_0562
Membrane protein.
  
    0.416
BTHE_1557
Rhomboid family membrane protein.
  
    0.416
Your Current Organism:
Bifidobacterium thermophilum
NCBI taxonomy Id: 33905
Other names: AS 1.2235, ATCC 25525, B. thermophilum, BCRC 14669, Bifidobacterium ruminale, Bifidobacterium thermophilium, CCRC 14669, CCRC:14669, CCUG 34983, CIP 105420, DSM 20210, HAMBI 111, LMG 11573, LMG:11573
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.