Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BTHE_0338 | BTHE_0499 | BTHE_0338 | BTHE_0499 | DNA/RNA helicase. | Hypothetical protein. | 0.463 |
BTHE_0338 | BTHE_0500 | BTHE_0338 | BTHE_0500 | DNA/RNA helicase. | ATPase AAA. | 0.477 |
BTHE_0499 | BTHE_0338 | BTHE_0499 | BTHE_0338 | Hypothetical protein. | DNA/RNA helicase. | 0.463 |
BTHE_0499 | BTHE_0500 | BTHE_0499 | BTHE_0500 | Hypothetical protein. | ATPase AAA. | 0.923 |
BTHE_0499 | BTHE_0501 | BTHE_0499 | BTHE_0501 | Hypothetical protein. | Sortase family protein. | 0.452 |
BTHE_0499 | rplJ | BTHE_0499 | BTHE_0498 | Hypothetical protein. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.411 |
BTHE_0500 | BTHE_0338 | BTHE_0500 | BTHE_0338 | ATPase AAA. | DNA/RNA helicase. | 0.477 |
BTHE_0500 | BTHE_0499 | BTHE_0500 | BTHE_0499 | ATPase AAA. | Hypothetical protein. | 0.923 |
BTHE_0500 | BTHE_0501 | BTHE_0500 | BTHE_0501 | ATPase AAA. | Sortase family protein. | 0.452 |
BTHE_0500 | BTHE_0571 | BTHE_0500 | BTHE_0571 | ATPase AAA. | Transposase, IS607 family. | 0.405 |
BTHE_0500 | rplJ | BTHE_0500 | BTHE_0498 | ATPase AAA. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.411 |
BTHE_0501 | BTHE_0499 | BTHE_0501 | BTHE_0499 | Sortase family protein. | Hypothetical protein. | 0.452 |
BTHE_0501 | BTHE_0500 | BTHE_0501 | BTHE_0500 | Sortase family protein. | ATPase AAA. | 0.452 |
BTHE_0571 | BTHE_0500 | BTHE_0571 | BTHE_0500 | Transposase, IS607 family. | ATPase AAA. | 0.405 |
rplJ | BTHE_0499 | BTHE_0498 | BTHE_0499 | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Hypothetical protein. | 0.411 |
rplJ | BTHE_0500 | BTHE_0498 | BTHE_0500 | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | ATPase AAA. | 0.411 |