Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BTHE_0131 | BTHE_0651 | BTHE_0131 | BTHE_0651 | Hypothetical protein; Belongs to the WXG100 family. | DNA translocase ftsK. | 0.832 |
BTHE_0649 | BTHE_0650 | BTHE_0649 | BTHE_0650 | CinA family protein; Belongs to the CinA family. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.886 |
BTHE_0649 | BTHE_0651 | BTHE_0649 | BTHE_0651 | CinA family protein; Belongs to the CinA family. | DNA translocase ftsK. | 0.739 |
BTHE_0649 | miaA | BTHE_0649 | BTHE_0652 | CinA family protein; Belongs to the CinA family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.665 |
BTHE_0650 | BTHE_0649 | BTHE_0650 | BTHE_0649 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | CinA family protein; Belongs to the CinA family. | 0.886 |
BTHE_0650 | BTHE_0651 | BTHE_0650 | BTHE_0651 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | DNA translocase ftsK. | 0.779 |
BTHE_0650 | miaA | BTHE_0650 | BTHE_0652 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.726 |
BTHE_0651 | BTHE_0131 | BTHE_0651 | BTHE_0131 | DNA translocase ftsK. | Hypothetical protein; Belongs to the WXG100 family. | 0.832 |
BTHE_0651 | BTHE_0649 | BTHE_0651 | BTHE_0649 | DNA translocase ftsK. | CinA family protein; Belongs to the CinA family. | 0.739 |
BTHE_0651 | BTHE_0650 | BTHE_0651 | BTHE_0650 | DNA translocase ftsK. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.779 |
BTHE_0651 | BTHE_0730 | BTHE_0651 | BTHE_0730 | DNA translocase ftsK. | Cell division protein ftsQ. | 0.833 |
BTHE_0651 | BTHE_0734 | BTHE_0651 | BTHE_0734 | DNA translocase ftsK. | Cell division protein ftsW. | 0.806 |
BTHE_0651 | BTHE_0741 | BTHE_0651 | BTHE_0741 | DNA translocase ftsK. | Peptidoglycan synthetase FtsI, penicillin-binding protein. | 0.763 |
BTHE_0651 | BTHE_1607 | BTHE_0651 | BTHE_1607 | DNA translocase ftsK. | Chromosome partitioning protein parB. | 0.849 |
BTHE_0651 | ftsZ | BTHE_0651 | BTHE_0775 | DNA translocase ftsK. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.742 |
BTHE_0651 | miaA | BTHE_0651 | BTHE_0652 | DNA translocase ftsK. | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.810 |
BTHE_0651 | xerD | BTHE_0651 | BTHE_0683 | DNA translocase ftsK. | Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.721 |
BTHE_0730 | BTHE_0651 | BTHE_0730 | BTHE_0651 | Cell division protein ftsQ. | DNA translocase ftsK. | 0.833 |
BTHE_0730 | BTHE_0734 | BTHE_0730 | BTHE_0734 | Cell division protein ftsQ. | Cell division protein ftsW. | 0.938 |
BTHE_0730 | BTHE_0741 | BTHE_0730 | BTHE_0741 | Cell division protein ftsQ. | Peptidoglycan synthetase FtsI, penicillin-binding protein. | 0.962 |
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