Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BTHE_0677 | BTHE_0679 | Prephenate dehydrogenase. | pheA Prephenate dehydratase. | 0.958 |
BTHE_0677 | BTHE_0680 | Prephenate dehydrogenase. | Hypothetical protein. | 0.692 |
BTHE_0677 | BTHE_0681 | Prephenate dehydrogenase. | GTP-binding protein TypA. | 0.609 |
BTHE_0677 | BTHE_0682 | Prephenate dehydrogenase. | ParA Chromosome partitioning protein. | 0.595 |
BTHE_0679 | BTHE_0677 | pheA Prephenate dehydratase. | Prephenate dehydrogenase. | 0.958 |
BTHE_0679 | BTHE_0680 | pheA Prephenate dehydratase. | Hypothetical protein. | 0.788 |
BTHE_0679 | BTHE_0681 | pheA Prephenate dehydratase. | GTP-binding protein TypA. | 0.656 |
BTHE_0679 | BTHE_0682 | pheA Prephenate dehydratase. | ParA Chromosome partitioning protein. | 0.612 |
BTHE_0680 | BTHE_0677 | Hypothetical protein. | Prephenate dehydrogenase. | 0.692 |
BTHE_0680 | BTHE_0679 | Hypothetical protein. | pheA Prephenate dehydratase. | 0.788 |
BTHE_0680 | BTHE_0681 | Hypothetical protein. | GTP-binding protein TypA. | 0.686 |
BTHE_0680 | BTHE_0682 | Hypothetical protein. | ParA Chromosome partitioning protein. | 0.616 |
BTHE_0680 | BTHE_0948 | Hypothetical protein. | Glycosyltransferase. | 0.402 |
BTHE_0680 | BTHE_1836 | Hypothetical protein. | Glycosyltransferase, family 1. | 0.402 |
BTHE_0681 | BTHE_0677 | GTP-binding protein TypA. | Prephenate dehydrogenase. | 0.609 |
BTHE_0681 | BTHE_0679 | GTP-binding protein TypA. | pheA Prephenate dehydratase. | 0.656 |
BTHE_0681 | BTHE_0680 | GTP-binding protein TypA. | Hypothetical protein. | 0.686 |
BTHE_0681 | BTHE_0682 | GTP-binding protein TypA. | ParA Chromosome partitioning protein. | 0.710 |
BTHE_0682 | BTHE_0677 | ParA Chromosome partitioning protein. | Prephenate dehydrogenase. | 0.595 |
BTHE_0682 | BTHE_0679 | ParA Chromosome partitioning protein. | pheA Prephenate dehydratase. | 0.612 |
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