STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTHE_0843Amino acid ABC superfamily ATP binding cassette transporter. (280 aa)    
Predicted Functional Partners:
BTHE_0844
Amino acid ABC transporter permease.
 
 0.973
BTHE_1285
Amino acid ABC transporter permease.
 
 0.900
BTHE_1247
ABC-type multidrug transport system, ATPase.
     
0.895
BTHE_0409
Amino acid ABC superfamily ATP binding cassette transporter, permease.
 
 
 0.882
BTHE_0411
Amino acid ABC superfamily ATP binding cassette transporter, permease.
 
 0.882
BTHE_0115
Glutamate transport system of ABC transporter, permease GluC.
 
 
 0.877
BTHE_0114
Glutamate transport system of ABC transporter, permease GluD.
 
 
 0.875
BTHE_0275
Permease protein of ABC transporter system.
 
 0.801
BTHE_0842
Acetyltransferase.
       0.773
BTHE_1286
Amino acid ABC transporter substrate binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.607
Your Current Organism:
Bifidobacterium thermophilum
NCBI taxonomy Id: 33905
Other names: AS 1.2235, ATCC 25525, B. thermophilum, BCRC 14669, Bifidobacterium ruminale, Bifidobacterium thermophilium, CCRC 14669, CCRC:14669, CCUG 34983, CIP 105420, DSM 20210, HAMBI 111, LMG 11573, LMG:11573
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.