STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTHE_1147Two-component response regulator. (250 aa)    
Predicted Functional Partners:
BTHE_1148
Signal transduction histidine kinase.
 
 0.990
BTHE_0373
Sensor-like histidine kinase senX3.
 
 
 0.901
BTHE_0511
Histidine kinase sensor of two-component system protein.
 
 0.896
BTHE_0127
Two component system histidine kinase.
 
 
 0.882
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
  
 0.812
BTHE_1149
Putative ImpB/MucB/SamB family protein.
     
 0.701
BTHE_0626
Hypothetical protein.
  
 
 0.680
BTHE_1144
CarD family transcriptional regulator.
  
  
 0.632
BTHE_1143
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
  
    0.553
BTHE_1952
Peptidase S24 and S26 domain protein.
     
 0.545
Your Current Organism:
Bifidobacterium thermophilum
NCBI taxonomy Id: 33905
Other names: AS 1.2235, ATCC 25525, B. thermophilum, BCRC 14669, Bifidobacterium ruminale, Bifidobacterium thermophilium, CCRC 14669, CCRC:14669, CCUG 34983, CIP 105420, DSM 20210, HAMBI 111, LMG 11573, LMG:11573
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