Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BTHE_0240 | cysS | BTHE_0240 | BTHE_1408 | Cystathionine beta-synthase. | CysS Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.908 |
BTHE_0849 | cysS | BTHE_0849 | BTHE_1408 | Translation elongation factor. | CysS Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.753 |
BTHE_0849 | leuS | BTHE_0849 | BTHE_0014 | Translation elongation factor. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.586 |
BTHE_0849 | pheT | BTHE_0849 | BTHE_0065 | Translation elongation factor. | PheT Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.554 |
BTHE_0849 | thrS | BTHE_0849 | BTHE_0945 | Translation elongation factor. | ThrS Threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.516 |
BTHE_1409 | BTHE_1410 | BTHE_1409 | BTHE_1410 | GuaA GMP synthase. | ABC transporter ATP-binding protein. | 0.781 |
BTHE_1409 | argS | BTHE_1409 | BTHE_1706 | GuaA GMP synthase. | arginyl-tRNA synthetase. | 0.418 |
BTHE_1409 | cysS | BTHE_1409 | BTHE_1408 | GuaA GMP synthase. | CysS Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.784 |
BTHE_1409 | pheT | BTHE_1409 | BTHE_0065 | GuaA GMP synthase. | PheT Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.562 |
BTHE_1410 | BTHE_1409 | BTHE_1410 | BTHE_1409 | ABC transporter ATP-binding protein. | GuaA GMP synthase. | 0.781 |
BTHE_1410 | cysS | BTHE_1410 | BTHE_1408 | ABC transporter ATP-binding protein. | CysS Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.714 |
argS | BTHE_1409 | BTHE_1706 | BTHE_1409 | arginyl-tRNA synthetase. | GuaA GMP synthase. | 0.418 |
argS | cysS | BTHE_1706 | BTHE_1408 | arginyl-tRNA synthetase. | CysS Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.741 |
argS | leuS | BTHE_1706 | BTHE_0014 | arginyl-tRNA synthetase. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.942 |
argS | pheT | BTHE_1706 | BTHE_0065 | arginyl-tRNA synthetase. | PheT Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.891 |
argS | serS | BTHE_1706 | BTHE_0391 | arginyl-tRNA synthetase. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.699 |
argS | thrS | BTHE_1706 | BTHE_0945 | arginyl-tRNA synthetase. | ThrS Threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.610 |
argS | valS | BTHE_1706 | BTHE_1673 | arginyl-tRNA synthetase. | valine-tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner. | 0.829 |
cysS | BTHE_0240 | BTHE_1408 | BTHE_0240 | CysS Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Cystathionine beta-synthase. | 0.908 |
cysS | BTHE_0849 | BTHE_1408 | BTHE_0849 | CysS Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Translation elongation factor. | 0.753 |
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