Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BTHE_0546 | BTHE_1363 | Hypothetical protein. | Serine/threonine protein kinase. | 0.733 |
BTHE_0546 | BTHE_1390 | Hypothetical protein. | TetR family transcriptional regulator. | 0.582 |
BTHE_0546 | BTHE_1424 | Hypothetical protein. | Hypothetical protein. | 0.565 |
BTHE_0546 | BTHE_1672 | Hypothetical protein. | Hypothetical protein. | 0.766 |
BTHE_0546 | BTHE_1747 | Hypothetical protein. | Putative transposase IS3 family. | 0.629 |
BTHE_0546 | BTHE_1763 | Hypothetical protein. | Hypothetical protein. | 0.770 |
BTHE_0546 | BTHE_1764 | Hypothetical protein. | Hypothetical protein. | 0.753 |
BTHE_0546 | BTHE_1775 | Hypothetical protein. | Permease protein of ABC transporter system. | 0.545 |
BTHE_0546 | BTHE_1778 | Hypothetical protein. | Glutamine amidotransferase, class-II. | 0.676 |
BTHE_1269 | BTHE_1363 | Putative membrane protein. | Serine/threonine protein kinase. | 0.669 |
BTHE_1269 | BTHE_1390 | Putative membrane protein. | TetR family transcriptional regulator. | 0.733 |
BTHE_1269 | BTHE_1424 | Putative membrane protein. | Hypothetical protein. | 0.629 |
BTHE_1269 | BTHE_1672 | Putative membrane protein. | Hypothetical protein. | 0.615 |
BTHE_1269 | BTHE_1763 | Putative membrane protein. | Hypothetical protein. | 0.546 |
BTHE_1269 | BTHE_1764 | Putative membrane protein. | Hypothetical protein. | 0.463 |
BTHE_1363 | BTHE_0546 | Serine/threonine protein kinase. | Hypothetical protein. | 0.733 |
BTHE_1363 | BTHE_1269 | Serine/threonine protein kinase. | Putative membrane protein. | 0.669 |
BTHE_1363 | BTHE_1390 | Serine/threonine protein kinase. | TetR family transcriptional regulator. | 0.739 |
BTHE_1363 | BTHE_1424 | Serine/threonine protein kinase. | Hypothetical protein. | 0.693 |
BTHE_1363 | BTHE_1672 | Serine/threonine protein kinase. | Hypothetical protein. | 0.773 |
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