Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BTHE_0234 | BTHE_1050 | Amino acid transporter. | Amylopullulanase. | 0.488 |
BTHE_0234 | BTHE_1051 | Amino acid transporter. | Amylopullulanase. | 0.488 |
BTHE_0234 | BTHE_1446 | Amino acid transporter. | Alpha amylase. | 0.479 |
BTHE_0234 | BTHE_1898 | Amino acid transporter. | Alpha amylase catalytic subunit. | 0.488 |
BTHE_0394 | BTHE_0875 | Glucose-specific II BC. | Iron-containing alcohol dehydrogenase. | 0.684 |
BTHE_0394 | BTHE_1050 | Glucose-specific II BC. | Amylopullulanase. | 0.832 |
BTHE_0394 | BTHE_1051 | Glucose-specific II BC. | Amylopullulanase. | 0.832 |
BTHE_0394 | BTHE_1446 | Glucose-specific II BC. | Alpha amylase. | 0.601 |
BTHE_0394 | BTHE_1807 | Glucose-specific II BC. | Maltose/maltodextrin-binding protein of ABC transporter system MalX. | 0.689 |
BTHE_0394 | BTHE_1898 | Glucose-specific II BC. | Alpha amylase catalytic subunit. | 0.832 |
BTHE_0481 | BTHE_1050 | Amino acid transporter. | Amylopullulanase. | 0.488 |
BTHE_0481 | BTHE_1051 | Amino acid transporter. | Amylopullulanase. | 0.488 |
BTHE_0481 | BTHE_1446 | Amino acid transporter. | Alpha amylase. | 0.479 |
BTHE_0481 | BTHE_1898 | Amino acid transporter. | Alpha amylase catalytic subunit. | 0.488 |
BTHE_0875 | BTHE_0394 | Iron-containing alcohol dehydrogenase. | Glucose-specific II BC. | 0.684 |
BTHE_0875 | BTHE_1050 | Iron-containing alcohol dehydrogenase. | Amylopullulanase. | 0.531 |
BTHE_0875 | BTHE_1051 | Iron-containing alcohol dehydrogenase. | Amylopullulanase. | 0.531 |
BTHE_0875 | BTHE_1446 | Iron-containing alcohol dehydrogenase. | Alpha amylase. | 0.508 |
BTHE_0875 | BTHE_1898 | Iron-containing alcohol dehydrogenase. | Alpha amylase catalytic subunit. | 0.531 |
BTHE_1050 | BTHE_0234 | Amylopullulanase. | Amino acid transporter. | 0.488 |
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