Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BTHE_0502 | BTHE_1390 | Fimbrial subunit FimA. | TetR family transcriptional regulator. | 0.489 |
BTHE_0502 | BTHE_1479 | Fimbrial subunit FimA. | Hypothetical protein. | 0.517 |
BTHE_0502 | BTHE_1672 | Fimbrial subunit FimA. | Hypothetical protein. | 0.596 |
BTHE_0502 | BTHE_1749 | Fimbrial subunit FimA. | Von Willebrand factor type A domain protein. | 0.707 |
BTHE_1269 | BTHE_1390 | Putative membrane protein. | TetR family transcriptional regulator. | 0.733 |
BTHE_1269 | BTHE_1479 | Putative membrane protein. | Hypothetical protein. | 0.528 |
BTHE_1269 | BTHE_1672 | Putative membrane protein. | Hypothetical protein. | 0.615 |
BTHE_1390 | BTHE_0502 | TetR family transcriptional regulator. | Fimbrial subunit FimA. | 0.489 |
BTHE_1390 | BTHE_1269 | TetR family transcriptional regulator. | Putative membrane protein. | 0.733 |
BTHE_1390 | BTHE_1469 | TetR family transcriptional regulator. | Family 2 glycosyltransferase. | 0.404 |
BTHE_1390 | BTHE_1479 | TetR family transcriptional regulator. | Hypothetical protein. | 0.485 |
BTHE_1390 | BTHE_1672 | TetR family transcriptional regulator. | Hypothetical protein. | 0.759 |
BTHE_1390 | BTHE_1749 | TetR family transcriptional regulator. | Von Willebrand factor type A domain protein. | 0.565 |
BTHE_1468 | BTHE_1479 | Hypothetical protein. | Hypothetical protein. | 0.470 |
BTHE_1469 | BTHE_1390 | Family 2 glycosyltransferase. | TetR family transcriptional regulator. | 0.404 |
BTHE_1469 | BTHE_1479 | Family 2 glycosyltransferase. | Hypothetical protein. | 0.769 |
BTHE_1469 | BTHE_1749 | Family 2 glycosyltransferase. | Von Willebrand factor type A domain protein. | 0.445 |
BTHE_1478 | BTHE_1479 | Glycosyl transferase family protein. | Hypothetical protein. | 0.557 |
BTHE_1478 | BTHE_1480 | Glycosyl transferase family protein. | dTDP-rhamnosyl transferase RfbF. | 0.417 |
BTHE_1479 | BTHE_0502 | Hypothetical protein. | Fimbrial subunit FimA. | 0.517 |
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