Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BTHE_1567 | BTHE_1569 | Protein phosphatase 2C domain-containing protein. | FHA domain protein. | 0.916 |
BTHE_1567 | BTHE_1570 | Protein phosphatase 2C domain-containing protein. | Hypothetical protein. | 0.874 |
BTHE_1567 | BTHE_1571 | Protein phosphatase 2C domain-containing protein. | FHA domain protein. | 0.947 |
BTHE_1567 | BTHE_1572 | Protein phosphatase 2C domain-containing protein. | Hypothetical protein. | 0.471 |
BTHE_1567 | BTHE_1573 | Protein phosphatase 2C domain-containing protein. | Peptidase S9, prolyl oligopeptidase active site domain-containing protein. | 0.572 |
BTHE_1567 | BTHE_1574 | Protein phosphatase 2C domain-containing protein. | pldB Lysophospholipase. | 0.656 |
BTHE_1569 | BTHE_1567 | FHA domain protein. | Protein phosphatase 2C domain-containing protein. | 0.916 |
BTHE_1569 | BTHE_1570 | FHA domain protein. | Hypothetical protein. | 0.773 |
BTHE_1569 | BTHE_1571 | FHA domain protein. | FHA domain protein. | 0.949 |
BTHE_1569 | BTHE_1572 | FHA domain protein. | Hypothetical protein. | 0.471 |
BTHE_1569 | BTHE_1573 | FHA domain protein. | Peptidase S9, prolyl oligopeptidase active site domain-containing protein. | 0.504 |
BTHE_1569 | BTHE_1574 | FHA domain protein. | pldB Lysophospholipase. | 0.475 |
BTHE_1570 | BTHE_1567 | Hypothetical protein. | Protein phosphatase 2C domain-containing protein. | 0.874 |
BTHE_1570 | BTHE_1569 | Hypothetical protein. | FHA domain protein. | 0.773 |
BTHE_1570 | BTHE_1571 | Hypothetical protein. | FHA domain protein. | 0.835 |
BTHE_1570 | BTHE_1572 | Hypothetical protein. | Hypothetical protein. | 0.471 |
BTHE_1570 | BTHE_1573 | Hypothetical protein. | Peptidase S9, prolyl oligopeptidase active site domain-containing protein. | 0.504 |
BTHE_1570 | BTHE_1574 | Hypothetical protein. | pldB Lysophospholipase. | 0.475 |
BTHE_1571 | BTHE_1567 | FHA domain protein. | Protein phosphatase 2C domain-containing protein. | 0.947 |
BTHE_1571 | BTHE_1569 | FHA domain protein. | FHA domain protein. | 0.949 |
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