STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTHE_1618Protein-disulfide isomerase. (329 aa)    
Predicted Functional Partners:
BTHE_0822
Vitamin K epoxide reductase family protein.
 
  
 0.857
BTHE_0087
Hypothetical protein.
  
     0.740
BTHE_0890
ATP-dependent DNA helicase, UvrD/REP family.
 
     0.738
BTHE_1002
Hypothetical protein.
  
     0.734
BTHE_0814
Hypothetical protein.
  
     0.731
BTHE_0052
Hypothetical protein.
 
     0.725
BTHE_1728
Hypothetical protein.
  
     0.719
BTHE_1610
Hypothetical protein.
  
     0.718
BTHE_0085
Hypothetical protein.
  
     0.706
xseB
Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
 
    0.703
Your Current Organism:
Bifidobacterium thermophilum
NCBI taxonomy Id: 33905
Other names: AS 1.2235, ATCC 25525, B. thermophilum, BCRC 14669, Bifidobacterium ruminale, Bifidobacterium thermophilium, CCRC 14669, CCRC:14669, CCUG 34983, CIP 105420, DSM 20210, HAMBI 111, LMG 11573, LMG:11573
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.