STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTHE_1733propionyl-CoA carboxylase beta chain. (542 aa)    
Predicted Functional Partners:
BTHE_1730
biotin-(acetyl-CoA carboxylase) ligase.
 
 
 0.999
BTHE_1732
AccC Acetyl-/propionyl-CoA carboxylase alpha chain.
 
 0.999
BTHE_0225
Biotin-dependent acyl-CoA carboxylase.
 
 0.998
BTHE_1118
Phosphate acetyltransferase.
    
 0.911
BTHE_0604
Formate acetyltransferase.
     
  0.900
BTHE_1734
Fas Type I multifunctional fatty acid synthase.
 
  
 0.862
BTHE_0877
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
  0.807
BTHE_1731
BioY family protein.
 
     0.758
BTHE_0531
Holo-[acyl-carrier protein] synthase, belongs to 4-phosphopantetheinyl transferase superfamily.
 
   
 0.698
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
  
 
 0.557
Your Current Organism:
Bifidobacterium thermophilum
NCBI taxonomy Id: 33905
Other names: AS 1.2235, ATCC 25525, B. thermophilum, BCRC 14669, Bifidobacterium ruminale, Bifidobacterium thermophilium, CCRC 14669, CCRC:14669, CCUG 34983, CIP 105420, DSM 20210, HAMBI 111, LMG 11573, LMG:11573
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.