Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BTHE_0394 | BTHE_1204 | Glucose-specific II BC. | Transcriptional regulator, LacI family. | 0.424 |
BTHE_0394 | BTHE_1341 | Glucose-specific II BC. | HPr family phosphocarrier protein. | 0.966 |
BTHE_0394 | BTHE_1522 | Glucose-specific II BC. | deoR family Bacterial regulatory protein. | 0.750 |
BTHE_0394 | BTHE_1803 | Glucose-specific II BC. | LacI-type transcriptional regulator. | 0.424 |
BTHE_1007 | BTHE_1204 | Glutamate synthase [NADPH] large chain. | Transcriptional regulator, LacI family. | 0.681 |
BTHE_1007 | BTHE_1803 | Glutamate synthase [NADPH] large chain. | LacI-type transcriptional regulator. | 0.681 |
BTHE_1204 | BTHE_0394 | Transcriptional regulator, LacI family. | Glucose-specific II BC. | 0.424 |
BTHE_1204 | BTHE_1007 | Transcriptional regulator, LacI family. | Glutamate synthase [NADPH] large chain. | 0.681 |
BTHE_1204 | BTHE_1341 | Transcriptional regulator, LacI family. | HPr family phosphocarrier protein. | 0.480 |
BTHE_1204 | BTHE_1803 | Transcriptional regulator, LacI family. | LacI-type transcriptional regulator. | 0.775 |
BTHE_1341 | BTHE_0394 | HPr family phosphocarrier protein. | Glucose-specific II BC. | 0.966 |
BTHE_1341 | BTHE_1204 | HPr family phosphocarrier protein. | Transcriptional regulator, LacI family. | 0.480 |
BTHE_1341 | BTHE_1803 | HPr family phosphocarrier protein. | LacI-type transcriptional regulator. | 0.480 |
BTHE_1522 | BTHE_0394 | deoR family Bacterial regulatory protein. | Glucose-specific II BC. | 0.750 |
BTHE_1522 | BTHE_1803 | deoR family Bacterial regulatory protein. | LacI-type transcriptional regulator. | 0.424 |
BTHE_1803 | BTHE_0394 | LacI-type transcriptional regulator. | Glucose-specific II BC. | 0.424 |
BTHE_1803 | BTHE_1007 | LacI-type transcriptional regulator. | Glutamate synthase [NADPH] large chain. | 0.681 |
BTHE_1803 | BTHE_1204 | LacI-type transcriptional regulator. | Transcriptional regulator, LacI family. | 0.775 |
BTHE_1803 | BTHE_1341 | LacI-type transcriptional regulator. | HPr family phosphocarrier protein. | 0.480 |
BTHE_1803 | BTHE_1522 | LacI-type transcriptional regulator. | deoR family Bacterial regulatory protein. | 0.424 |