STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTHE_1812Hypothetical protein. (222 aa)    
Predicted Functional Partners:
BTHE_1813
Putative raffinose/stachyose transporter ABC transporter system, permease.
 
  
 0.801
BTHE_1814
Putative raffinose/stachyose transporter ABC transporter system, permease.
 
    0.787
BTHE_1804
TraX protein.
 
     0.751
BTHE_1816
Sugar ABC transporter, solute-binding protein.
 
    0.635
BTHE_1222
Sugars ABC transporter substrate-binding protein.
 
    0.581
BTHE_1807
Maltose/maltodextrin-binding protein of ABC transporter system MalX.
 
     0.497
BTHE_1991
Hypothetical protein.
  
     0.412
BTHE_1122
Hypothetical protein.
  
     0.409
Your Current Organism:
Bifidobacterium thermophilum
NCBI taxonomy Id: 33905
Other names: AS 1.2235, ATCC 25525, B. thermophilum, BCRC 14669, Bifidobacterium ruminale, Bifidobacterium thermophilium, CCRC 14669, CCRC:14669, CCUG 34983, CIP 105420, DSM 20210, HAMBI 111, LMG 11573, LMG:11573
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.