Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BTHE_0096 | BTHE_0269 | ABC superfamily ATP binding cassette transporter ABC protein. | ATP-binding protein of ABC transporter system. | 0.764 |
BTHE_0096 | BTHE_1140 | ABC superfamily ATP binding cassette transporter ABC protein. | Mn2+-Zn2+ transporter of ABC trasporter system, permease MntA. | 0.618 |
BTHE_0096 | BTHE_1672 | ABC superfamily ATP binding cassette transporter ABC protein. | Hypothetical protein. | 0.451 |
BTHE_0096 | BTHE_1763 | ABC superfamily ATP binding cassette transporter ABC protein. | Hypothetical protein. | 0.547 |
BTHE_0096 | BTHE_1764 | ABC superfamily ATP binding cassette transporter ABC protein. | Hypothetical protein. | 0.477 |
BTHE_0096 | BTHE_1776 | ABC superfamily ATP binding cassette transporter ABC protein. | ABC transporter ATP-binding protein. | 0.672 |
BTHE_0096 | BTHE_1968 | ABC superfamily ATP binding cassette transporter ABC protein. | ABC transporter ATP-binding protein. | 0.770 |
BTHE_0269 | BTHE_0096 | ATP-binding protein of ABC transporter system. | ABC superfamily ATP binding cassette transporter ABC protein. | 0.764 |
BTHE_0269 | BTHE_1776 | ATP-binding protein of ABC transporter system. | ABC transporter ATP-binding protein. | 0.731 |
BTHE_0269 | BTHE_1968 | ATP-binding protein of ABC transporter system. | ABC transporter ATP-binding protein. | 0.767 |
BTHE_0557 | BTHE_0558 | Hypothetical protein. | ABC transporter. | 0.417 |
BTHE_0557 | BTHE_1968 | Hypothetical protein. | ABC transporter ATP-binding protein. | 0.537 |
BTHE_0558 | BTHE_0557 | ABC transporter. | Hypothetical protein. | 0.417 |
BTHE_0558 | BTHE_1968 | ABC transporter. | ABC transporter ATP-binding protein. | 0.890 |
BTHE_0905 | BTHE_1968 | ABC transporter ATP-binding protein. | ABC transporter ATP-binding protein. | 0.636 |
BTHE_1140 | BTHE_0096 | Mn2+-Zn2+ transporter of ABC trasporter system, permease MntA. | ABC superfamily ATP binding cassette transporter ABC protein. | 0.618 |
BTHE_1140 | BTHE_1776 | Mn2+-Zn2+ transporter of ABC trasporter system, permease MntA. | ABC transporter ATP-binding protein. | 0.420 |
BTHE_1140 | BTHE_1968 | Mn2+-Zn2+ transporter of ABC trasporter system, permease MntA. | ABC transporter ATP-binding protein. | 0.669 |
BTHE_1672 | BTHE_0096 | Hypothetical protein. | ABC superfamily ATP binding cassette transporter ABC protein. | 0.451 |
BTHE_1672 | BTHE_1763 | Hypothetical protein. | Hypothetical protein. | 0.774 |
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