Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BTHE_1738 | BTHE_1740 | Cyclic nucleotide-binding domain protein. | Copper chaperone. | 0.879 |
BTHE_1738 | BTHE_1741 | Cyclic nucleotide-binding domain protein. | Copper importing ATPase. | 0.851 |
BTHE_1738 | BTHE_2000 | Cyclic nucleotide-binding domain protein. | Hypothetical protein. | 0.852 |
BTHE_1740 | BTHE_1738 | Copper chaperone. | Cyclic nucleotide-binding domain protein. | 0.879 |
BTHE_1740 | BTHE_1741 | Copper chaperone. | Copper importing ATPase. | 0.975 |
BTHE_1740 | BTHE_1856 | Copper chaperone. | Polysaccharide pyruvyl transferase. | 0.426 |
BTHE_1740 | BTHE_2000 | Copper chaperone. | Hypothetical protein. | 0.898 |
BTHE_1741 | BTHE_1738 | Copper importing ATPase. | Cyclic nucleotide-binding domain protein. | 0.851 |
BTHE_1741 | BTHE_1740 | Copper importing ATPase. | Copper chaperone. | 0.975 |
BTHE_1741 | BTHE_2000 | Copper importing ATPase. | Hypothetical protein. | 0.818 |
BTHE_1847 | BTHE_1855 | Polysaccharide pyruvyl transferase. | Polysaccharide biosynthesis protein. | 0.488 |
BTHE_1847 | BTHE_2000 | Polysaccharide pyruvyl transferase. | Hypothetical protein. | 0.431 |
BTHE_1855 | BTHE_1847 | Polysaccharide biosynthesis protein. | Polysaccharide pyruvyl transferase. | 0.488 |
BTHE_1855 | BTHE_1856 | Polysaccharide biosynthesis protein. | Polysaccharide pyruvyl transferase. | 0.929 |
BTHE_1855 | BTHE_2000 | Polysaccharide biosynthesis protein. | Hypothetical protein. | 0.534 |
BTHE_1856 | BTHE_1740 | Polysaccharide pyruvyl transferase. | Copper chaperone. | 0.426 |
BTHE_1856 | BTHE_1855 | Polysaccharide pyruvyl transferase. | Polysaccharide biosynthesis protein. | 0.929 |
BTHE_1856 | BTHE_2000 | Polysaccharide pyruvyl transferase. | Hypothetical protein. | 0.568 |
BTHE_2000 | BTHE_1738 | Hypothetical protein. | Cyclic nucleotide-binding domain protein. | 0.852 |
BTHE_2000 | BTHE_1740 | Hypothetical protein. | Copper chaperone. | 0.898 |
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