STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC15713.1Energy-coupling factor transport system permease protein. (314 aa)    
Predicted Functional Partners:
ecfA
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 0.997
SMC15716.1
Energy-coupling factor transport system ATP-binding protein.
 0.997
SMC17280.1
Energy-coupling factor transport system ATP-binding protein.
 0.985
SMC17285.1
Energy-coupling factor transporter ATPase.
 0.985
SMC17027.1
ECF transporter S component, folate family.
  
 
 0.923
SMC15688.1
Protein of unknown function.
   
 
 0.921
SMC18812.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.882
SMC19871.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.882
ligA
DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
       0.796
SMC15711.1
Uncharacterized membrane protein YbhN, UPF0104 family.
       0.779
Your Current Organism:
Mycoplasma agassizii
NCBI taxonomy Id: 33922
Other names: ATCC 700616, CCUG 53180, M. agassizii, Mycoplasma agassizii Brown et al. 2001, strain PS6
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