STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC15816.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
SMC18931.1
Hypothetical protein.
  
  
  0.842
SMC17263.1
Hypothetical protein.
  
  
  0.837
SMC15817.1
Hypothetical protein.
   
   0.821
SMC17265.1
Haloacid dehalogenase-like hydrolase.
  
  
  0.821
SMC15814.1
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
  
  
 0.815
SMC20043.1
Hypothetical protein.
  
  
  0.798
SMC15840.1
Hypothetical protein.
    
  0.647
SMC18932.1
Riboflavin kinase / FMN adenylyltransferase.
 
 
 0.598
SMC17503.1
Hypothetical protein.
  
  
  0.589
SMC15832.1
Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.569
Your Current Organism:
Mycoplasma agassizii
NCBI taxonomy Id: 33922
Other names: ATCC 700616, CCUG 53180, M. agassizii, Mycoplasma agassizii Brown et al. 2001, strain PS6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.