STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC16744.1Subtilase family protein. (729 aa)    
Predicted Functional Partners:
SMC19125.1
Putative immunoglobulin-blocking virulence protein.
  
  0.784
SMC16758.1
Hypothetical protein.
       0.773
SMC19620.1
Putative lipoprotein, C-terminal region.
  
  0.634
SMC19080.1
Putative immunoglobulin-blocking virulence protein.
  
  0.620
SMC19623.1
MG185/MG260 protein.
  
  0.613
SMC19265.1
Alpha/beta hydrolase family protein.
 
  
 0.571
SMC19070.1
Hypothetical protein.
  
     0.513
SMC18802.1
Oligopeptide transport system substrate-binding protein.
  
    0.445
SMC16731.1
Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family.
     
 0.429
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
       0.423
Your Current Organism:
Mycoplasma agassizii
NCBI taxonomy Id: 33922
Other names: ATCC 700616, CCUG 53180, M. agassizii, Mycoplasma agassizii Brown et al. 2001, strain PS6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.