STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC16780.1Signal peptidase II; Belongs to the peptidase A8 family. (234 aa)    
Predicted Functional Partners:
ileS
Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.
  
  
 0.903
SMC16767.1
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
    0.821
SMC18553.1
FtsX-like permease family protein.
  
   
 0.783
SMC18561.1
Putative ABC transport system permease protein.
  
   
 0.773
rpsF
Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
     0.770
SMC15950.1
Hypothetical protein.
  
     0.769
SMC18932.1
Riboflavin kinase / FMN adenylyltransferase.
 
    0.769
SMC19623.1
MG185/MG260 protein.
  
   
 0.768
SMC18486.1
Superfamily I DNA and/or RNA helicase.
 
     0.765
SMC15757.1
Protein of unknown function.
  
     0.759
Your Current Organism:
Mycoplasma agassizii
NCBI taxonomy Id: 33922
Other names: ATCC 700616, CCUG 53180, M. agassizii, Mycoplasma agassizii Brown et al. 2001, strain PS6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.