STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC17896.1Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. (593 aa)    
Predicted Functional Partners:
SMC17893.1
Simple sugar transport system ATP-binding protein.
 
 0.998
SMC17901.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
SMC17883.1
Basic membrane lipoprotein Med, substrate-binding protein (PBP1-ABC) superfamily.
 
 
 0.971
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.570
SMC17596.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
   
  0.401
SMC18634.1
Ribose transport system ATP-binding protein.
   
  0.401
Your Current Organism:
Mycoplasma agassizii
NCBI taxonomy Id: 33922
Other names: ATCC 700616, CCUG 53180, M. agassizii, Mycoplasma agassizii Brown et al. 2001, strain PS6
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