STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC18063.1Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit. (103 aa)    
Predicted Functional Partners:
SMC18073.1
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A.
       0.773
gatB
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
       0.773
SMC18081.1
Membrane protein.
       0.773
SMC18041.1
Holo-[acyl-carrier protein] synthase; Belongs to the P-Pant transferase superfamily.
       0.757
SMC18042.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.757
SMC18044.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
       0.757
SMC18054.1
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
       0.757
SMC18062.1
23S rRNA pseudouridine955/2504/2580 synthase.
       0.757
SMC18039.1
Leucyl aminopeptidase; Belongs to the peptidase M17 family.
       0.453
SMC18040.1
Leucyl aminopeptidase; Belongs to the peptidase M17 family.
       0.453
Your Current Organism:
Mycoplasma agassizii
NCBI taxonomy Id: 33922
Other names: ATCC 700616, CCUG 53180, M. agassizii, Mycoplasma agassizii Brown et al. 2001, strain PS6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.