STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC18415.1Pullulanase; Belongs to the glycosyl hydrolase 13 family. (724 aa)    
Predicted Functional Partners:
SMC18416.1
1,4-alpha-glucan branching enzyme.
 
 
0.928
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.921
SMC18413.1
Glucose-1-phosphate adenylyltransferase.
  
 
 0.901
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.901
SMC18424.1
Phosphomannomutase.
    
 0.748
SMC15775.1
Oligo-1,6-glucosidase.
 
 
 0.614
SMC15770.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
 
     0.510
SMC16525.1
Glucan 1,6-alpha-glucosidase.
  
 
 0.475
SMC15779.1
Trehalose and maltose hydrolase (possible phosphorylase).
    
  0.445
SMC15764.1
Pullanase-associated domain-containing protein.
  
 
 0.439
Your Current Organism:
Mycoplasma agassizii
NCBI taxonomy Id: 33922
Other names: ATCC 700616, CCUG 53180, M. agassizii, Mycoplasma agassizii Brown et al. 2001, strain PS6
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