STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC18663.1N-6 DNA Methylase. (487 aa)    
Predicted Functional Partners:
SMC18665.1
N-6 DNA Methylase.
     0.993
SMC18673.1
Type I restriction modification DNA specificity domain-containing protein.
     0.958
SMC18668.1
Type I restriction modification DNA specificity domain-containing protein.
       0.727
SMC15657.1
Type I restriction enzyme, R subunit.
  
 
 0.690
SMC16179.1
Type I restriction enzyme, R subunit.
  
 
 0.690
SMC19947.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.690
SMC16177.1
Type I restriction enzyme, S subunit.
  
   0.617
SMC15782.1
Type I restriction enzyme, S subunit.
  
   0.610
SMC19180.1
Type I restriction modification DNA specificity domain-containing protein.
  
   0.610
SMC19234.1
Type I restriction enzyme, S subunit.
  
   0.610
Your Current Organism:
Mycoplasma agassizii
NCBI taxonomy Id: 33922
Other names: ATCC 700616, CCUG 53180, M. agassizii, Mycoplasma agassizii Brown et al. 2001, strain PS6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.