STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOY82400.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)    
Predicted Functional Partners:
KOY82399.1
Cell division protein MinJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.810
KOY83629.1
DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
ftsL
Cell division protein; Essential cell division protein; Belongs to the FtsL family.
  
     0.772
KOY81050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.764
KOY82459.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
KOY81426.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
KOY81218.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
KOY80215.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
KOY82458.1
CAAX protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.736
KOY82410.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.721
Your Current Organism:
Lysinibacillus macroides
NCBI taxonomy Id: 33935
Other names: ATCC 12905, Bacillus macroides, DSM 54, L. macroides, LMG 18474, LMG:18474, Lineola longa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.