STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOY81269.1Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)    
Predicted Functional Partners:
KOY81270.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
KOY81271.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
KOY81284.1
Phage tail sheath protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.985
KOY81268.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.961
KOY81496.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.961
KOY81497.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.955
KOY81272.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.947
KOY83427.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.911
KOY84123.1
Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.877
KOY81279.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.856
Your Current Organism:
Lysinibacillus macroides
NCBI taxonomy Id: 33935
Other names: ATCC 12905, Bacillus macroides, DSM 54, L. macroides, LMG 18474, LMG:18474, Lineola longa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.