STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOY80444.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)    
Predicted Functional Partners:
KOY83703.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.757
KOY81958.1
Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.655
KOY83351.1
General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.651
lacD
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldolase LacD family.
  
    0.645
KOY83830.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.623
KOY80404.1
Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.616
KOY80554.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.602
KOY80443.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.546
KOY82050.1
Butanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.543
KOY84057.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.489
Your Current Organism:
Lysinibacillus macroides
NCBI taxonomy Id: 33935
Other names: ATCC 12905, Bacillus macroides, DSM 54, L. macroides, LMG 18474, LMG:18474, Lineola longa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.