STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZN97006.1Stage V sporulation protein R; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)    
Predicted Functional Partners:
KZN96987.1
Protein prkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.987
KZN96988.1
Sporulation protein YhbH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.
 
  
 0.986
KZN97224.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.570
hmp
Nitric oxide dioxygenase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
       0.522
KZN97671.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.497
KZN95295.1
Spore coat protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.492
KZN97660.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
KZN96190.1
Stage IV sporulation protein FB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.449
KZN94632.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.433
KZN97468.1
Flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WrbA family.
   
    0.410
Your Current Organism:
Aeribacillus pallidus
NCBI taxonomy Id: 33936
Other names: A. pallidus, ATCC 51176, Bacillus pallidus, DSM 3670, Geobacillus pallidus, Geobacillus sp. 8, Geobacillus sp. 8m3, LMG 19006, LMG:19006, strain H12
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