STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sspNAcid-soluble spore protein N; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspN family. (47 aa)    
Predicted Functional Partners:
tlp
Small acid-soluble spore protein Tlp; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Tlp family.
  
    0.873
sspP
Acid-soluble spore protein P; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspP family.
   
  
 0.624
sspK
Small, acid-soluble spore protein K; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SspK family.
   
  
 0.445
KZN97656.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.439
KZN97711.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.420
KZN96307.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.418
Your Current Organism:
Aeribacillus pallidus
NCBI taxonomy Id: 33936
Other names: A. pallidus, ATCC 51176, Bacillus pallidus, DSM 3670, Geobacillus pallidus, Geobacillus sp. 8, Geobacillus sp. 8m3, LMG 19006, LMG:19006, strain H12
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