STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZN96604.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (591 aa)    
Predicted Functional Partners:
KZN96605.1
Heme ABC transporter substrate-binding protein IsdE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.898
KZN96608.1
SrtB family sortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.892
KZN96609.1
Iron-hydroxamate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.797
KZN96603.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
      
0.765
KZN96612.1
Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.763
KZN96606.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.731
KZN96607.1
Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.541
KZN95944.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
KZN96610.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
  
 0.457
KZN96090.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.431
Your Current Organism:
Aeribacillus pallidus
NCBI taxonomy Id: 33936
Other names: A. pallidus, ATCC 51176, Bacillus pallidus, DSM 3670, Geobacillus pallidus, Geobacillus sp. 8, Geobacillus sp. 8m3, LMG 19006, LMG:19006, strain H12
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